cellcharter.pl.autok_stability

cellcharter.pl.autok_stability(autok, save=None, return_ax=False)

Plot the clustering stability.

The clustering stability is computed by cellcharter.tl.ClusterAutoK.

Parameters:

• autok (ClusterAutoK) – The fitted cellcharter.tl.ClusterAutoK model.

• save (Union[str, Path, None] (default: None)) – Whether to save the plot.

• similarity_function – The similarity function to use. Defaults to sklearn.metrics.fowlkes_mallows_score().

Return type:

None

Returns:

Nothing, just plots the figure and optionally saves the plot.