Graph

gr.aggregate_neighbors(adata, n_layers[, ...])	Aggregate the features from each neighborhood layers and concatenate them, and optionally with the cells' features, into a single vector.
gr.connected_components(adata[, ...])	Compute the connected components of the spatial graph.
gr.diff_nhood_enrichment(adata, cluster_key, ...)	Differential neighborhood enrichment between conditions.
gr.enrichment(adata, group_key, label_key[, ...])	Compute the enrichment of label_key in group_key.
gr.nhood_enrichment(adata, cluster_key[, ...])	A modified version of squidpy's neighborhood enrichment.
gr.remove_long_links(adata[, ...])	Remove links between cells at a distance bigger than a certain percentile of all positive distances.
gr.remove_intra_cluster_links(adata, cluster_key)	Remove links between cells that belong to the same cluster.